MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Citrobacter koseri 19428wH4_BL23

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PROKKA Genome Annotation:

contigs: 33

bases: 4,826,282 bps

CDS: 4,459

rRNA: 10

Repeat region:

tmRNA: 1

tRNA: 81

misc RNA:

Total features: 4,551

Total number of protein coding genes annotated/found: 4,459

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Molecule	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5017\|JADGKP010000019.1	SEQF5017_00027	NA AA	255/85	476-222	putative protein YciO
SEQF5017\|JADGKP010000011.1	SEQF5017_00013	NA AA	1029/343	286-1314	UDP-N-acetylenolpyruvoylglucosamine reductase
SEQF5017\|JADGKP010000011.1	SEQF5017_00014	NA AA	963/321	1311-2273	Bifunctional ligase/repressor BirA
SEQF5017\|JADGKP010000011.1	SEQF5017_00015	NA AA	927/309	3230-2304	Pantothenate kinase
SEQF5017\|JADGKP010000011.1	SEQF5017_00016	NA AA	225/75	3635-3411	hypothetical protein
SEQF5017\|JADGKP010000018.1	SEQF5017_00026	NA AA	285/95	31-315	hypothetical protein
SEQF5017\|JADGKP010000004.1	SEQF5017_03565	NA AA	705/235	270-974	HTH-type transcriptional repressor NanR
SEQF5017\|JADGKP010000004.1	SEQF5017_03566	NA AA	1428/476	986-2413	putative transport protein HsrA
SEQF5017\|JADGKP010000004.1	SEQF5017_03567	NA AA	999/333	3377-2379	Ribose operon repressor
SEQF5017\|JADGKP010000004.1	SEQF5017_03568	NA AA	930/310	4310-3381	Ribokinase
SEQF5017\|JADGKP010000004.1	SEQF5017_03569	NA AA	891/297	5341-4451	Ribose import binding protein RbsB
SEQF5017\|JADGKP010000004.1	SEQF5017_03570	NA AA	966/322	6331-5366	Ribose import permease protein RbsC
SEQF5017\|JADGKP010000004.1	SEQF5017_03571	NA AA	1506/502	7842-6337	Ribose import ATP-binding protein RbsA
SEQF5017\|JADGKP010000004.1	SEQF5017_03572	NA AA	420/140	8269-7850	D-ribose pyranase
SEQF5017\|JADGKP010000004.1	SEQF5017_03573	NA AA	1869/623	10309-8441	Low affinity potassium transport system protein kup
SEQF5017\|JADGKP010000004.1	SEQF5017_03574	NA AA	1497/499	10614-12110	ATPase RavA
SEQF5017\|JADGKP010000004.1	SEQF5017_03575	NA AA	1452/484	12104-13555	Protein ViaA
SEQF5017\|JADGKP010000004.1	SEQF5017_03576	NA AA	993/331	14552-13560	Aspartate--ammonia ligase
SEQF5017\|JADGKP010000004.1	SEQF5017_03577	NA AA	459/153	14704-15162	Regulatory protein AsnC
SEQF5017\|JADGKP010000004.1	SEQF5017_03578	NA AA	450/150	15251-15700	Protein MioC

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Page last updated: July 7, 2021 08:39:35